Training Grant Publications

Kim S, Jeong K, Bhutani K, Lee J, Patel A, Scott E, Nam H, Lee H, Gleeson JG, Bafna V. "Virmid: accurate detection of somatic mutations with sample impurity inference." Genome Biol. 2013;14(8):R90. PubMed PMC DOI

Lo JH, von Maltzahn G, Douglass J, Park JH, Sailor MJ, Ruoslahti E, Bhatia SN. "Nanoparticle amplification via photothermal unveiling of cryptic collagen binding sites." J Mater Chem B. 2013;1(39):5235-5240. PubMed PMC DOI

Massanella M, Singhania A, Beliakova-Bethell N, Pier R, Lada SM, White CH, Pérez-Santiago J, Blanco J, Richman DD, Little SJ, Woelk CH. "Differential gene expression in HIV-infected individuals following ART." Antiviral Res. 2013;100(2):420-8. PubMed PMC DOI

Szpankowski L, Encalada SE, Goldstein LS. "Subpixel colocalization reveals amyloid precursor protein-dependent kinesin-1 and dynein association with axonal vesicles." Proc Natl Acad Sci U S A. 2012;109(22):8582-7. PubMed PMC DOI

Encalada SE, Szpankowski L, Xia CH, Goldstein LS. "Stable kinesin and dynein assemblies drive the axonal transport of mammalian prion protein vesicles." Cell. 2011;144(4):551-65. PubMed PMC DOI

Narayanan T, Gersten M, Subramaniam S, Grama A. "Modularity detection in protein-protein interaction networks." BMC Res Notes. 2011;4:569. PubMed PMC DOI

Payne SH, Loomis WF. "Retention and loss of amino acid biosynthetic pathways based on analysis of whole-genome sequences." Eukaryot Cell. 2006;5(2):272-6. PubMed PMC DOI