Alumni
The UC San Diego Libraries provide access to official copies of all UC San Diego dissertations. Search the UC San Diego Libraries Catalog for UC San Diego Bioinformatics dissertations.
Website
Email: andreabcastro@ucsd.edu
Andrea Castro
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Determinants for Effective Neoantigen Based Anti-Tumor Immune Response Abstract: Link Advisor(s): Hannah Carter , Ludmil AlexandrovWebsite
Email: Nathaniel.P.DelosSantos@jacobs.ucsd.edu
Nathaniel Delos Santos
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Score-based Transcription Factor Motif Enrichment Strategies for Analysis of Transcriptional Regulation of Immune Response Abstract: Link Advisor(s): Christopher Benner , Melissa GymrekKevin Blansit
Degree Conferred: Ph.D. Bioinformatics and Systems Biology Thesis: Advancing Cardiovascular MRI Acquisition Through Deep Convolutional Neural Network-Based Localization Abstract: Link Advisor(s): Albert HsiaoArgus Athanas-Crannell
Degree Conferred: Ph.D. Bioinformatics and Systems Biology Thesis: Leveraging Longitudinal Data for Predictive Modeling in Clinical and Mental Health Settings Abstract: Link Advisor(s): Nicholas Schork , Lucila Ohno-MachadoMichelle Dow
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Integrative Multi-omics Analysis to Understand Cancer and Anticancer Therapy Abstract: Link Advisor(s): Hannah CarterYingxiang Huang
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Preservation of Patient Level Privacy : Federated Classification and Calibration Models Abstract: Link Advisor(s): Lucila Ohno-MachadoWebsite
Email: mkrdonovan@gmail.com
Margaret Donovan
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Understanding the cellular heterogeneity in fetal-like and adult tissues to study cell-type-specific functional genetic variation Abstract: Link Advisor(s): Kelly FrazerJing Zhang
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Supporting Diabetes Patient Decisional Needs Through Online Health Communities Abstract: Link Advisor(s): Vineet Bafna , Michael HogarthStephanie Feudjio Feupe
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Deep Characterization of the Contribution of Short Tandem Repeats Across Tissues Abstract: Link Advisor(s): Melissa Gymrek , Vineet BafnaKemal Eren
Degree Conferred: Ph.D. Bioinformatics and Systems Biology Thesis: Understanding the evolution of HIV-1 Env through computational analysis and visualization of long-read amplicon sequences Abstract: Link Advisor(s): Joel Wertheim , Siavash MirarabEmail: w2wei@ucsd.edu
Wei Wei
Degree Conferred: Ph.D. Bioinformatics and Systems Biology with a Specialization in Biomedical Informatics Thesis: Information Retrieval in Biomedical Research: From Articles to DatasetsAbstract: Link Advisor(s): Lucila Ohno-Machado , Xiaoqian Jiang
Email: edlevy@ucsd.edu