Biomedical Informatics Faculty

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Robert El-Kareh

Assistant Professor, School of Medicine

  • Decision Support Systems

Research Focus: Biomedical Informatics

relkareh [at] ucsd.edu
(858) 822-7776
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Charles Elkan

Professor, Computer Science and Engineering

  • Quantitative Foundations of Computational Biology
  • Genetic and Molecular Networks
  • Privacy Technology, Data Sharing, and Big Data Analytics
  • Biomedical Natural Language Processing

Research Focus: Artificial Intelligence

celkan [at] ucsd.edu
(858) 534-8897
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Yoav Freund

Professor, Computer Science and Engineering

  • Quantitative Foundations of Computational Biology
  • Epigenomics and Gene Expression Control
  • Privacy Technology, Data Sharing, and Big Data Analytics

Research Focus: Machine learning, computational statistics

yfreund [at] ucsd.edu
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Olivier Harismendy

Assistant Professor, Division of Biomedical Informatics

  • Epigenomics and Gene Expression Control
  • Genetic and Molecular Networks
  • Predictive Modeling and Personalized Medicine
  • Bioinformatics Applications in Human Disease

Research Focus: My laboratory develops genome-wide assays and analysis for personalized cancer care. Particular focus includes genetics of cancer susceptibility and drug response, secure computing and data sharing.

oharismendy [at] ucsd.edu
858-246-0248
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Chun-Nan Hsu

Associate Professor of Medicine, Division of Biomedical Informatics

  • Predictive Modeling and Personalized Medicine
  • Data Models and Knowledge Representation
  • Biomedical Natural Language Processing

Research Focus: Information extraction from biomedical literature and clinical notes by machine learning

chunnan [at] ucsd.edu
(858) 822-2690
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Hyeon-eui Kim

Assistant Adjunct Professor, Division of Biomedical Informatics

  • Data Models and Knowledge Representation

Research Focus: Impact of information technology on patient care. Clinical decision support systems. Consumer health informatics.

hyk038 [at] ucsd.edu
(858) 822-4368
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Lucila Ohno-Machado

Professor, Division of Biomedical Informatics

  • Epigenomics and Gene Expression Control
  • Predictive Modeling and Personalized Medicine
  • Privacy Technology, Data Sharing, and Big Data Analytics

Research Focus: Biomedical Informatics, predictive modeling, biomedical data analytics

machado [at] ucsd.edu
(858) 822-4931
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Dorothy Sears

Associate Professor, School of Medicine

  • Proteomics and Metabolomics
  • Epigenomics and Gene Expression Control
  • Bioinformatics Applications in Human Disease

Research Focus: Mechanisms and biomarkers of nsulin resistance, type 2 diabetes, obesity, breast cancer, PPARgamma, inflammation

dsears [at] ucsd.edu
(858) 534-8898
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Staal Vinterbo

Associate Adjunct Professor, Division of Biomedical Informatics

  • Privacy Technology, Data Sharing, and Big Data Analytics

Research Focus: Methods for synthesis and adaptation of predictive models. Methods for disclosure control in disseminated data.

svinterbo [at] ucsd.edu
(858) 822-4388
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Christopher Woelk

Assistant Professor; Dir., Genomics Core, CFAR, School of Medicine

  • Epigenomics and Gene Expression Control
  • Genetic and Molecular Networks
  • Bioinformatics Applications in Human Disease

Research Focus: Infectious diseases, biomarker identification, gene expression, microbial genomics, molecular evolution, innate immunity

cwoelk [at] ucsd.edu
(858) 552-8585 x7193
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Jason Young

Assistant Professor, Division of Biomedical Informatics

  • Bioinformatics Applications in Human Disease

Research Focus: Open source biomedical/clinical research software development. Infectious disease transmission research. Functional genomics.

jay007 [at] ucsd.edu
(619) 543-8073
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